PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68800.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 119aa    MW: 12993.9 Da    PI: 9.538
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68800.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.20.0001621551554
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++  +++ L++l+ +      +K + a++L +A eYI  L
  EPS68800.1 21 NLTARIAALQQLVSPY-----GKTDTASVLLEALEYITFL 55
                67779999****9999.....9***************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.715655IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.42E-11670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-71564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
SVEPKRLKAT SFSSSKDKKE NLTARIAALQ QLVSPYGKTD TASVLLEALE YITFLHEQVK  60
VLSAPYLRTA PWRSPNDDEE KCGLKSKGLC LVPLSFTLGV ANSNGADIWA PVKNSPMKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091562.19e-53PREDICTED: transcription factor bHLH113 isoform X2
RefseqXP_011091561.19e-53PREDICTED: transcription factor bHLH113 isoform X2
RefseqXP_011091560.11e-52PREDICTED: transcription factor bHLH113 isoform X1
SwissprotQ94JL34e-29BH112_ARATH; Transcription factor bHLH112
TrEMBLS8CPW83e-83S8CPW8_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc08g014120.2.16e-49(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.59e-46bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]